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MICCAI 2019-2026 Open Source Papers

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MICCAI 2026 Papers with Code

Source: MICCAI open-access proceedings

miccai26

Title First author Code Dataset information Paper
3D Cerebrovascular Shape Completion from Biplane Angiography and CTA Prior Jehkul, Janik Code TopBrain CTA Dataset: https://topbrain2025.grand-challenge.org/data/ Clinical CTA/DSA dataset (Brigham and Women’s Hospital): Not publicly available due to PHI constraintsDataset 1 Information & reviews
3D Classification of Paramagnetic Rim Lesions in Multiple Sclerosis via Asymmetric QSM–FLAIR Modeling Pignedoli, Veronica Code N/A Information & reviews
A Clinical Guideline-Grounded Hybrid Agentic Framework for Holistic Epilepsy Management Pham, Duy Khoa Code N/A Information & reviews
A Confounder-aware Representation Learning Framework for Alzheimer’s Disease Classification Chen, Yuanhao Code N/A Information & reviews
A Counterfactual Framework for Directional Cell–Cell Interaction Analysis in Spatial Transcriptomics Anzum, Humaira Code We utilized spatial transcriptomics data from human cholangiocarcinoma TMAs, selecting 38 independent cores generated via the Xenium platform. These data were obtained from The University of Texas MD Anderson Cancer Center and are not publicly available at this time. The code is demonstrated using a publicly available breast cancer dataset with the following link: https://github.com/Snigdha022/Counterfactual-Cell-Influence-Spatial-Transcriptomics/tree/main/data/rawDataset 1 Information & reviews
A Flexible Structure-Guided Feature Aggregation Paradigm for Efficient Vascular Representation Qi, Yaolei Code N/A Information & reviews
A Guideline-Aware AI Agent for Zero-Shot Target Volume Auto-Delineation Kim, Yoon Jo Code N/A Information & reviews
A Hierarchical Multi-Task Framework for Dementia Diagnosis via Pathological Feature Learning from Multi-Organ Data Zhao, Shilun Code N/A Information & reviews
A Modality-Aware Mixture-of-Experts Framework for Clinical Multimodal Breast Ultrasound Diagnosis Suo, Hao Code N/A Information & reviews
A Multi-center Benchmark for Abdominal Disease Diagnosis and Report Generation from Non-Contrast CT Elbakry, Mariam Code N/A Information & reviews
A Multi-view, Hybrid, Hypergraph Learning Framework with Causal Perturbation for Early Alzheimer’s Disease Diagnosis Jia, Yifan Code ADNI dataset: https://adni.loni.usc.edu/Dataset 1 Information & reviews
A Multimodal 3D Foundation Model for Light Sheet Fluorescence Microscopy Enables Few-Shot Segmentation, Classification, and Deblurring Scheinfeld, Adina Code https://zenodo.org/records/20149070Dataset 1 Information & reviews
A Neurosymbolic Framework for Interpretable Skeleton-Based Seizure Detection via Concept-Driven Logical Reasoning Ilyas, Talha Code https://github.com/Mr-TalhaIlyas/CDSDDataset 1 Information & reviews
A Real-World Evaluation of Failure Detection for Liver CT Segmentation Bennett, Jeddy Code N/A Information & reviews
A Unified Few-Shot Framework for Multi-Atlas Neuroimaging Segmentation Leveraging Vision Foundation Models Guo, Bocheng Code HCP dataset: https://www.humanconnectomeproject.org/data/Dataset 1 Information & reviews
A Unified Framework for Joint Detection of Lacunes and Enlarged Perivascular Spaces He, Lucas Code VALDO dataset: https://zenodo.org/records/4520773 EPAD dataset: https://ep-ad.orgDataset 1 · Dataset 2 Information & reviews
AC-MIL: Weakly-Supervised Atrial LGE-MRI Quality Assessment via Adversarial Concept Disentanglement Sultan, K. M. Arefeen Code N/A Information & reviews
ACA: Post-hoc Adaptive Logit Alignment for 3D Medical Image Segmentation Dong, Nanyu Code N/A Information & reviews
Accurate Reconstruction of the Standard 12-Lead ECG from a Single Lead Based on Inherent Principles of ECG Seo, Dong-hyuk Code PTB-XL dataset: https://physionet.org/content/ptb-xl/1.0.3/ cusph dataset: https://physionet.org/content/ecg-arrhythmia/1.0.0/Dataset 1 · Dataset 2 Information & reviews
AdaSurvMamba: Dynamic Fusion and Semantic Scanning for Multimodal Survival Analysis Zhong, Jialong Code N/A Information & reviews
Addressing Gradient Conflicts in Multimodal Fundus Disease Recognition with Fusion-Guided Learning Liu, Xiaozhou Code N/A Information & reviews
AEGIS: Anatomy-Embedded Group-Invariant Segmentation for Fair Medical Foundation Models Wang, Sen Code PI-CAI: https://pi-cai.grand-challenge.org/ Harvard-FairSeg: https://github.com/luoyan407/FairSegDataset 1 · Dataset 2 Information & reviews
Age Conditional Longitudinal Forecasting of Adolescent Functional Connectivity via Brownian Bridge Diffusion Models Zhang, Rongye Code Chinese Color Nest Project(CCNP) dataset: https://www.scidb.cn/en/detail?dataSetId=c81f0e90a51b4cfca348ce4da6ca734eDataset 1 Information & reviews
AGE-MIL: Anchor-Guided Evidence Learning for Patient-Level Prediction Niu, Jiawei Code N/A Information & reviews
Agent-Guided Relational Concept Discovery: Toward Interpretable Surgical Margin Assessment Maghsoodi, Nooshin Code Our dataset is private, and we are not allowed to publish it. Information & reviews
AGGRNet: Selective Feature Extraction and Aggregation for Enhanced Medical Image Classification Makwe, Ansh Code N/A Information & reviews
AHPR-Net: Anatomy-aware Hierarchical Prompting Refinement Network for Spine Image Segmentation Zhao, Junyong Code N/A Information & reviews
AI-Driven Pulmonary Congestion Assessment for Lung Ultrasound via Segmentation-Guided Transformers Fooladgar, Fahimeh Code https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/HFTV7DDataset 1 Information & reviews
ALSAnchorNet: Biologically Informed Multimodal MRI Fusion for Amyotrophic Lateral Sclerosis Diagnosis Shen, Xiongri Code Multimodal MRI ALS dataset: https://github.com/AQ-MedAI/ALSAnchorNetDataset 1 Information & reviews
An Artifact-Based Agent Framework for Adaptive and Reproducible Medical Image Processing Zuo, Lianrui Code NLST dataset: https://www.cancerimagingarchive.net/collection/nlst/Dataset 1 Information & reviews
Anatomically Accurate 3D Vessel Generation via 3-Phase Chebyshev Curve Diffusion Mo, Jihwan Code ImageCAS dataset: https://github.com/XiaoweiXu/ImageCAS-A-Large-Scale-Dataset-and-Benchmark-for-Coronary-Artery-Segmentation-based-on-CTDataset 1 Information & reviews
Anatomically Consistent TMJ Disc Segmentation via Semantic Anchoring and Clinical Priors Ju, Dayun Code N/A Information & reviews
Anatomy- and Site-Guided 3D Patch Diffusion for Robust MRI Harmonization Hache, Barnabé Code SALD dataset: https://fcon_1000.projects.nitrc.org/indi/retro/sald.html IXI dataset: https://brain-development.org/ixi-dataset/ OASIS-3 dataset: https://sites.wustl.edu/oasisbrains/home/oasis-3/ AIBL dataset: https://adni.loni.usc.edu/aibl-australian-imaging-biomarkers-and-lifestyle-study-of-ageing-18-month-data-now-released/ SRPBS dataset: https://www.synapse.org/Synapse:syn22317079Dataset 1 · Dataset 2 · Dataset 3 · Dataset 4 · Dataset 5 Information & reviews
Anatomy-Anchored Self-Supervision: Distilling Vision Foundation Models for Invariant Ultrasound Representation Zhu, Chunzheng Code N/A Information & reviews
Anatomy-Aware Hierarchical Multiple Instance Learning for Interpretable COPD Diagnosis and Phenotype Analysis Ahmadi, Raha Code N/A Information & reviews
Anatomy-Aware Prediction of Bronchoscopic Accessibility from 3D CT Peng, Linkai Code https://nubagcilab.github.io/BronchoAccess/Dataset 1 Information & reviews
Anatomy-Conditioned Domain Randomization for Zero-Shot 3D Cerebrovascular Segmentation Pentassuglia, Matteo Code N/A Information & reviews
Anatomy-Grounded Synthetic Coronary Angiography for Geometry-Informed Multi-view Matching Lee, In Kyu Code https://drive.google.com/drive/folders/1JXRTGlTbWIbb-hvGqmrZnPXJZs86otZr?usp=sharingDataset 1 Information & reviews
Anatomy-Guided Residual Motion Diffusion for Controllable 4D Cardiac MRI Synthesis Cao, Yiheng Code ACDC dataset: https://www.creatis.insa-lyon.fr/Challenge/acdc/databases.html Kaggle dataset: https://www.kaggle.com/c/second-annual-data-science-bowl/data M&Ms dataset: https://www.ub.edu/mnms/ M&Ms2 dataset: https://www.ub.edu/mnms-2/Dataset 1 · Dataset 2 · Dataset 3 · Dataset 4 Information & reviews
Anatomy-Structured Hierarchical MIL for Weakly-Supervised Thoracic Disease Detection in Chest X-Rays Kim, Jeongin Code N/A Information & reviews
Anatomy-Texture Aware Safe Gradient Guidance for Source-Free Domain Adaptive Echocardiography Video Segmentation Lv, Jinrong Code CAMUS dataset: https://www.creatis.insa-lyon.fr/Challenge/camus/ EchoNet-Dynamic dataset: https://echonet.github.io/dynamic/ EchoNet-Pediatric dataset: https://echonet.github.io/pediatric/Dataset 1 · Dataset 2 · Dataset 3 Information & reviews
Angio-Stitch: An Unsupervised Coarse-to-Fine Framework for Sequential Stitching of Confocal Laser Endomicroscopy Images Hu, Xiaoshi Code N/A Information & reviews
Anomaly Detection in Fetal Echocardiography via Cross-Modal Translation and Region-Discriminated Error Calibration Yang, Qianye Code N/A Information & reviews
AnomExpert: Identifying and Selecting Anatomical Planes for Prenatal Ultrasound Anomaly Diagnosis Wang, Jian Code N/A Information & reviews
APEX-SAM: Anatomy-Aware Prompting with Expert Retrieval for Training-Free Medical Image Segmentation Mao, Zhihao Code CHAOS dataset: https://chaos.grand-challenge.org/ BTCV (Multi-Atlas Labeling Beyond the Cranial Vault) dataset: https://www.synapse.org/Synapse:syn3193805 MS-CMRSeg 2019 dataset: https://zmiclab.github.io/zxh/0/mscmrseg19/Dataset 1 · Dataset 2 · Dataset 3 Information & reviews
Arrhythmia-Robust Cine-MRI via Latent Motion Artifact Characterization Ning, Gaoning Code N/A Information & reviews
AS-TIME: Time-Conditioned Multimodal Modeling of Aortic Stenosis Progression Kim, Diane Code N/A Information & reviews
ASTAR: Automated Induction of STAndardized Radiology Reporting Templates from Large-Scale Clinical Free-Text Corpora Zhang, Xinfeng Code N/A Information & reviews
Asym-MSF: Asymmetric Multi-scale Structural Fusion for Robust BCVA Prediction with Self-supervised Fidelity Constraints Wang, Yifei Code N/A Information & reviews
AsynDiff: Asynchronous-Timestep Diffusion with Noise-Aware Attention for Multi-sequence MRI Synthesis Han, Luyi Code BraTS2021: https://www.cancerimagingarchive.net/analysis-result/rsna-asnr-miccai-brats-2021/ BraTS-GLI (2024): https://www.synapse.org/Synapse:syn53708249/wiki/626323Dataset 1 · Dataset 2 Information & reviews
AtomiMed: Hierarchical Atomic Fact-Checking for Universal Clinical-Aware Medical Report Evaluation Wang, Yuan Code N/A Information & reviews
Attention is Matter for Inclusiveness: Generating Synthetic CT for Patients with Hip Implants Zala, Nico Camillo Code SynthRAD2023 dataset (Dataset 3): https://zenodo.org/records/7260705Dataset 1 Information & reviews
Attention-Based Prototype Calibration for Multi-Rater Few-Shot Medical Image Segmentation Vu, Truong Code CURVAS dataset: https://zenodo.org/records/13767408 QUBIQ Brain-Growth dataset: https://qubiq21.grand-challenge.org/participation/Dataset 1 · Dataset 2 Information & reviews
Attenuation-Resilient Alternating Optimization for Laparoscopic Liver Landmark Detection Liu, Lanqing Code P2ILF dataset: https://p2ilf.grand-challenge.org/ L3D dataset: https://github.com/PJLallen/D2GPLand L3D-2K dataset: https://github.com/cuiruize/D2GPLand-PlusDataset 1 · Dataset 2 · Dataset 3 Information & reviews
Automated Disentangling Analysis of Skin Colour for Lesion Images Yang, Wenbo Code N/A Information & reviews
Automated Optical Density Normalization for Myelin Quantification: Cross-Modal Validation with 7T Ex Vivo MRI Khodakarami, Zahra Code N/A Information & reviews
Automatic LV Localization and Short-Axis Plane Estimation from Arbitrary CMR Slice Yu, Yi Code N/A Information & reviews
B-spline Activations as Intrinsic Uncertainty Estimators in Medical Image Segmentation Du, Wenju Code CVC-ClinicDB (colonoscopy): https://polyp.grand-challenge.org/CVCClinicDB/ BUSI - Breast Ultrasound Images (ultrasound): https://scholar.cu.edu.eg/?q=afahmy/pages/dataset ISIC 2018 Task 1 - lesion segmentation (dermoscopy): https://challenge.isic-archive.com/data/ REFUGE (retinal fundus): https://refuge.grand-challenge.org/Dataset 1 · Dataset 2 · Dataset 3 · Dataset 4 Information & reviews
Bayesian Temporal Pose Networks for Uncertainty-Calibrated Laparoscopic Tool Pose Tracking Choudhry, Omar Code https://doi.org/10.5281/zenodo.20752650Dataset 1 Information & reviews
Bayesian Topological Analysis of Brain Networks Zhu, Xukun Code Duke/UNC Alzheimer’s Disease Research Center (ADRC) resting-state fMRI dataset: https://dukeuncadrc.org/Dataset 1 Information & reviews
BC-MultiSet: A Multi-target Dataset and Benchmark for Clinical Tasks in Breast Cancer Illarionova, Svetlana Code BC-MultiSet dataset: http://doi.org/10.5281/zenodo.20717567Dataset 1 Information & reviews
BCER Agent: Reliable Long-Horizon MRI Workflow Execution via Compilation, Artifact Binding, and Bounded Local Recovery Long, Ziyang Code N/A Information & reviews
BDFR-Net: Boundary-Aware Dual-Domain Feature Reconstruction Network for Fetal Ultrasound Image Segmentation Zhang, Wenfeng Code Miccai2024 dataset: https://www.kaggle.com/datasets/aspirexxx/iugc-ultrasound-video-dataset-miccai-2024 JNU-IFM dataset: https://figshare.com/articles/dataset/JNU-IFM/14371652 PSFHS dataset: https://zenodo.org/records/10969427 FH-PS-AoP dataset: https://www.kaggle.com/datasets/aspirexxx/psfhs-ultrasound-dataset-miccai-2023Dataset 1 · Dataset 2 · Dataset 3 · Dataset 4 Information & reviews
Be Indiscrete: The Benefits of Learning Continuous Spine Degeneration Severity Scores Monzon, Maria Code N/A Information & reviews
Benchmarking Pathology Foundation Models for Spatial Domain Understanding Zhao, Bokai Code N/A Information & reviews
Benchmarking Video Foundation Models for Remote Parkinson’s Disease Screening Islam, Md Saiful Code https://rochester.app.box.com/s/utw6cxrodcixenks1dxfbo9kagal7djp The dataset is described in the GitHub repository . We are actively working to add more types of anonymized data and will update the repository accordingly.Dataset 1 · Dataset 2 Information & reviews
Better Said Than Seen: Exposing and Mitigating Modality Collapse with ICD-11-Grounded Evaluation Hassan, Lara Code DermaVQA dataset: https://osf.io/72rp3/Dataset 1 Information & reviews
Beyond Clean Test Sets: Spurious Correlations in Medical Vision-language Models and the Role of Concept Supervision Corbetta, Valentina Code https://github.com/Emory-HITI/EMBED\_Open\_Data https://csyizhou.github.io/FGADR/ https://zenodo.org/records/20849422Dataset 1 · Dataset 2 · Dataset 3 Information & reviews
Beyond Stochastic Diffusion: Trajectory-Consistent Deterministic Flow Matching for Fluorescence Molecular Tomography Xue, Qianqian Code N/A Information & reviews
Beyond the Batch: Momentum-Updated Virtual Cohorts for 3D PET-CT Prognosis Liang, Xinglong Code N/A Information & reviews
Beyond Visual Cues: CoT-Enhanced Reasoning for Semi-supervised Medical Image Segmentation Chen, Yuming Code N/A Information & reviews
Beyond Visual Forensics: Auditing Multimodal Robustness for Synthetic Medical Image Detection Chiu, Ching-Hao Code N/A Information & reviews
BiC-ODE: Bidirectionally Coupled Neural ODEs for Rapid Laminar Surface Reconstruction of the Human Cortex from 5T MRI Cao, Shui [Code](https://github.com/s